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(more) computationally singular

More ideas You can also perform an Eigenvalue decomposition of the covariance matrix and see along which directions the singularity occurs and how strong it is. Consequences could be rescaling (or

How to insert a certain model in SVM regarding to fixed kernels ?

Dear R Users Suppose that we want to regress a certain autoregressive model using SVM. We have our data and also some fixed kernels in libSVM behinde e1071 in front. The question Where can we

get the wald chi square in binary logistic regression

severine.erhel@(protected) a �crit > hello > > I work since a few time on R and i wanted to know how to obtain the Wald chi > square value when you make a binary logistic regression. In fact i have th

Help with doing overlays plots...

I have a data frame with three columns type (a factor with two values "Monolithic " and "Compositional ") size (numeric) and states (numeric). I want to create a plot where size goes on the x-axis

computationally singular

Hi I have a dataset which has around 138 variables and 30 000 cases. I am trying to calculate a mahalanobis distance matrix for them and my procedure is like this Suppose my data is stored in mymat

Building R 2.1.0 on AIX 5.2.0.0

Hello The set of messages below reports a successful build of 2.0.0 on AIX 5.2 using GCC 3.3.2 I 've been trying for a while now to build 2.1.0 and 2.1.1 and have been unsuccessful. I 've tried - G

get the wald chi square in binary logistic regression

hello I work since a few time on R and i wanted to know how to obtain the Wald chi square value when you make a binary logistic regression. In fact i have the z value and the signification but is t

filled.contour help

Hello I plot with filled.contour and have this problem. There is an area that I want to cover with angled shading lines to represent NA in my data. Very much appreciate help. Thanks Mark pal <-

vector vs array

Hi! OK I 'm trying to select some "useful outliers " from my dataset I defined 11 "treshold " values (1 for each level of a variable (sampling site) as follows tresholds <-function(x) { tapply(x mm$N

using < <- with a changing variable name (substitute?)

I have a matrix r and a scalar d and I would like to apply the following functions to each of its elements 1. if r < 0 no change 2. if 0 < r < d replace element by zero 3. if d < r replace ele

INDVAL and mvpart

Hi I 'd like to perform Dufrene-Legendre Indicator Species Analysis for a multivariate regression tree. However I have problems with arguments of duleg(veg class numitr 1000)function. How to obtain

heatmap -- invisible list?

Hi all In heatmap 's documentation it mentions that the output value is actually an invisible list...how would one access this list? Thanks Jake

xyplot with 2 y-axes

Dear R-helpers I 'm trying to get xyplot to plot 2 y-axes. I looked at the examples and googled around. This is how far I got so far. test <-data.frame(a rnorm(100) b rnorm(100)*10 ind rep(1 10 10)

coefficient of polynomial expansion

Hi I would like to get the coefficient of polynomial expansion. For example (1+ x)^2 1 + 2x + x^2 and the coefficients are 1 2 and 1. (1 + x + x^2)^3 1 + 3*x + 6*x^2 + 7*x^3 + 6*x^4 + 3*x^5

selecting outliers

Hi everybody I 'd like to know if there 's an easy way for extracting outliers record from a dataset in order to perform further analysis on them. Thanks Alessandro

Groups in histograms?

Dear list I would like to create histograms for up to three groups with distincive colour/pattern in a trellis panel. However I have not been able to find a way to do this. histogram does not see

R: matrix sizes

hi all assume that one is doing a simulation. in each iteration one produces a vector of results. this vectors length might change for each different iteration. how can one construct a matrix that co

R: cbind

hi all are we able to combine column vectors of different lengths such that the result appears in matrix form? e.g. a 1 b 1 3 d 1 4 then z CBIND(a b d) 1 1 1 2 2 3 3 4 i stil want the

help on regression by subsets in dataset

Hi Everyone May I request for a small help while performing the regression analysis. I would like to know is there any possibility of conducting the regression for different data subsets (in the sam

installing problems about randomForest

Hi all When I tried to install package randomForest it gave out the following error message " > install.packages( "randomForest " dependencies TRUE) trying URL 'http //www.lmbe.seu.edu.cn/CRAN

nested logit with latent classes

Hi Everybody I am interested in estimating nested logit with latent classes at the lower level. I have seen the codes for conditional logit and latent class analysis but I haven�t found anything ab

Searchable Mailing List Archives Down

Hi I was a user of the searchable Mail Archives which you have linked from somewhere on your homepage. http //maths.newcastle.edu.au/~rking/R/ This link is out of order. I know there is a search at

Alerte Virus

Le mail envoye a 20stephane.dumas@(protected) le lundi 08 ao�t contient un virus

chisq.test

Hi I am trying to use this function. Can anyone show me how I would input the following example? Chi-Squared (40-30)^2 + (20-30)^2 + (30-30)^2 30 30

R-help Digest, Vol 30, Issue 6

On Fri 5 Aug 2005 Julia Reid wrote > Subject [R] GAP pointer > > I am trying to do a simple segregation analysis using the GAP package. I > have the documentation for pointer but I desperately ne

extract t-values from pairwise.t.test

Hi how can I extract the t-values after running a pairwise.t.test? The output just list the p-values. Many thanks for your help. Cheers Guido

prediction from glm...

Hello r-help I 'm trying to fit birds counts over years using glm. In fact I 'm trying to reproduce an analysis already perform with genstat (attach document). I have done (with Estate and year as fa

Bold-face axes with Boxplot

I am wondering if someone could cast some the box plot function. I have been having trouble manipulating boxplot to display the x & y axes in bold. I had the same problem with the x & y labels but m

help regarding functions & loops

I am new to R so excuse me if its too basic. I have a vector of scores S {s1 s2 s3 sn} n could be very large. I want to find p-value for each score and

gnomeGUI on FC4

It seems nice that R is part of the 'walled garden ' of applications specifically configured to run under Fedora Core 4 (Linux). The gnomeGUI has a separate installation routine under FC4 and yum tells
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