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Off topic:Spam on R help increase?
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Re: R package development in windows BayesianFilter detected
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subset
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[R] Timings of function execution in R [was Re: R in Industry]
acos(0 5) == pi/3 FALSE
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New Quantian release with over 800 CRAN/BioC packages

[ Reposting this here as this Quantian release contains - all CRAN packages as of December 10 2005 * except the Windows only ones (BRugs mimR rcom RWinEdt) * and three that would n

Plotting model over data

Dear R-list. How would I plot model result over actual data? Here are the lme results Linear mixed-effects model fit by REML Data D-set AIC BIC logLik 884.3326 911.428 -432.

Fitting binomial lmer-model, high deviance and low logLik

Hello I have a problem when fitting a mixed generalised linear model with the lmer-function in the Matrix package version 0.98-7. I have a respons variable (sfox) that is 1 or 0 whether a roe dee

Design library

Dear friends Hello I 'm a PhD student in Edinburgh University and interested in survival analysis. By chance I found design library in Splus software. I have some questions about it and it 's highly

Problem with RSPerl

Hello I am using RSPerl of omegahat.org to call R modules from Perl . I have tried running the test pl script provided by RSPerl package. It gives the following error perl symbol lookup error /

Updated version of gdata, gtools, gplots and gmodels

Hello We have submitted the updated version of gdata gmodels gplots and gtools to CRAN. Summary of the changes is attached at the end. Best Nitin

glmmADMB: Generalized Linear Mixed Models using AD Model Builder

Dear R-users Half a year ago we put out the R package "glmmADMB " for fitting overdispersed count data. http //otter-rsch.com/admbre/examples/glmmadmb/glmmADMB.html Several people who used this pa

tool for cluster analysis

I have Windows XP Professional Version 2002 and the R-Version 2.1.1. I did cluster analysis with the cluster package and the agnes (method �ward�). The results are satisfactory. But the dendrogram of

package for factor analysis

I have Windows XP Professional Version 2002 and the R-Version 2.1.1. I want to do factor analysis with R. In Google Search I find the reference to the RScaLAPACK-Package but my R-Version 2.1.1. told

Memory shortage running Repeated Measures (nlme)

Dear group I tried to run a Repeated Mesures Anova for Mixed effects model and I got a warnning after entering the model specification saying "Reached total allocation of 254Mb see help(memory.siz

About help on 'mahalanobis '

Hi help on 'mahalanobis ' (in the stats package in Rv2.2.0) now says "Description Returns the Mahalanobis distance of all rows in 'x ' and the vector mu 'center ' with respect to Sigma

broken package?

I 've just tried to install the tseries package (which seems to include quite a bit) and got the following results package 'dynlm ' successfully unpacked and MD5 sums checked package 'leaps ' successf

Glitch when creating online help

Sorting vectors according to a desired correlation coef

Dear all First time posting in this list. This is my question I have three vectors (x y z) containing random numbers from three different distributions (normal random exponential). I want to sort

"Simplifying " matrices ?

Hi again the previous answers were great. I was able to do what was planned. Now I would like to do the following to a matrix || year | event | team | total || where I can have multiple "event "

getting faster results

Hey Can anyone answer this question. I am working with really large datasets and most of the programs I have been running take quite some time. I heard that R may be faster in Unix. I

Age of an object?

It would be nice to have a date stamp on an object. In S/Splus this was always available because objects were files. I have looked around but I presume this information is not available. ---------

what does this warnings mean? and what should I do?

I use lmer to fit a mixed effect model.It give some warnings.what does this warnings mean? and what should I do? > (fm2.mlm <- lmer(qd ~ edu + jiankang + peixun +hunyin + cadcj + age + age2 + sex + d

bug in geoR (?)

I 've enconuntered this problem with the last cran version of geoR > library(geoR) > day <- rep(1 2 each 5) > coords <- matrix(rep(runif(10) 2) 10 2) > data <- rnorm(10) > data[1] <- NA > as.geoda

correct C function usage

Hello I am not sure if I am interfacing with C correctly and _safely_ or if there is a better way esp. with regards to terminating the "returned " array. I am trying to fill an int array with value

Fwd: Re: Wavelet reconstruction

I realized that I may not have answered the question you were asking and that no one else has responded. I can across a similar problem and may have an answer to your question now. If you have bot

Manipulating matrices

Hi I 'm pretty new to R and I 've been having some problems filtering data in matrices. I have the following initial dataset || year | name | varA || I have multiple values for "varA " for the same

Ploting graphics using X tints from a color

Hi I 'm trying to draw a 2D plot using multiple tints of red. The (simplified) setup is the following || year | x | y || My idea is that each year is plotted with a different tint of red. Older yea

Frailty with a Weibull PH Model

Hi I am trying to fit a Weibull PH model with a gaussian frailty term (kidney data). Is the following approach correct? 1. Fit the model using survReg with the frailty term added in. Kidn1 <-survre

batch mode problem

Hi ok I know I should be using a later version than 1.7.1 (64 bit) but it 's not in my power. So here is the problem In my R script I declare a data.frame that consists of 40 vectors each havin

creating a subset of a dataset using ifelse statement?

I am using R in a Microsoft Windows environment. I have a dataset called ?mp1b?. I have a variable called h. h can take a value from -1 to 5. If h <1 I want to create a new dataset

fSeries

I 'm trying to use garchFit from fSeries with Student or Skewed Student conditionnal distribution. Let 's say that eps (vector) is my series of daily log-returns data(EuStockMarkets) eps diff(log(E

Polytopic Vector Analysis (PVA)

I am curious whether anybody has or is developing this capability within R. I have not found any software yet that has this capability and I am not sure whether it is too new a method and nobody is a

Forcing model parameters to a constant (in GLMs)

Hi I 'm looking for a way to bind specific model parameters to a constant (in my case 0) before fitting the model. I 'm fitting multinomial logistic regression models (via glm()). Assuming a mode

interruption when pasting code into R under linux

hello has anyone come across the following rather mysterious problem when pasting large bits of code (100 and more lines) into the R console with the central mouse button (under linux) only part o
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